BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012G09SP1|AL426419
(813 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig143 1104 0.0
>3x_Contig143
Length = 1412
Score = 1104 bits (556), Expect = 0.0
Identities = 557/558 (99%)
Strand = Plus / Minus
Query: 1 gatctagcaaaatgakatcagtcaatttaaactttggctatatgaacgaaaagcacacac 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gatctagcaaaatgagatcagtcaatttaaactttggctatatgaacgaaaagcacacac 499
Query: 61 aataccggagatttgatacgtgtcaactactatttagtcgtaggtgttcatcttttagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aataccggagatttgatacgtgtcaactactatttagtcgtaggtgttcatcttttagtg 439
Query: 121 atcagagtttaacaaagctaccgataccataatgctgaagttttttttacgagcagcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 atcagagtttaacaaagctaccgataccataatgctgaagttttttttacgagcagcact 379
Query: 181 ccctgctagcggtattaggacgtcgacgattaaccgtaccagattttatcgaaccaccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ccctgctagcggtattaggacgtcgacgattaaccgtaccagattttatcgaaccaccag 319
Query: 241 acttttaagaaacaacggtacaggtaataagtttgacctttctaagcttacgagagaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 acttttaagaaacaacggtacaggtaataagtttgacctttctaagcttacgagagaaga 259
Query: 301 gattaaagaaattcgtgattataagattagtgctgcccgcaggtacaaggaccgtacggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gattaaagaaattcgtgattataagattagtgctgcccgcaggtacaaggaccgtacggt 199
Query: 361 tgcgttttatttcactagtattgctgttttatttctgggacttgcgtacgctgcggtgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tgcgttttatttcactagtattgctgttttatttctgggacttgcgtacgctgcggtgcc 139
Query: 421 attatacagagccatctgtgctagaactgggtacggtggtattccaatcacagacaagcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 attatacagagccatctgtgctagaactgggtacggtggtattccaatcacagacaagcg 79
Query: 481 taagtttaccgatgataagttgatacctgttgattctaataagagaataagaatttcgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 taagtttaccgatgataagttgatacctgttgattctaataagagaataagaatttcgtt 19
Query: 541 taccagtgaagtgtcaca 558
||||||||||||||||||
Sbjct: 18 taccagtgaagtgtcaca 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5483
Number of Sequences: 1807
Number of extensions: 5483
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 1
length of query: 813
length of database: 10,358,551
effective HSP length: 16
effective length of query: 797
effective length of database: 10,329,639
effective search space: 8232722283
effective search space used: 8232722283
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)